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elvers About

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elvers

elvers
About
Quickstart
Choosing and Configuring Workflows
Available Workflows
Available Workflows
- Eel Pond Protocol
- Protein-level Assembly Workflow
- Subworkflows
  Subworkflows
- Programs Used
  Programs Used
  - get_data
  - fastqc
  - trimmomatic
  - khmer
  - trinity
  - get_reference
  - dammit
  - sourmash
  - salmon
  - deseq2
  - plass
  - pear
  - paladin
  - rcorrector
For Developers
For Developers
- Under the Hood

About elvers¶

elvers uses snakemake for workflow management and conda for software installation. The code can be found here.

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